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Cities have unique microbiome ‘fingerprint,’ study finds

| | April 25, 2016
Dr. Jennifer Doudna, one of the key researchers in the discovery of CRISPR
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If you’re like most people in North America, you probably spend most of your time indoors. Leave home in the morning, drive to work, stay in your cube all day, head home again. Ninety percent of our lives are spent inside a built environment of some kind – ones that we share with millions of invisible microbes.

Scientists increasingly recognize that rooms and buildings have their own microbiomes, and that those microbial roommates may affect the health of human inhabitants. Those microbes vary depending on what city you’re in, according to a new study.

The researchers looked at what drives the composition of microbes inside nine different offices across three cities. Gregory Caporaso and his team at Northern Arizona University, where he studies microbiomes as an assistant professor in the Department of Biological Sciences, collected samples in offices in Flagstaff, Ariz., San Diego and Toronto, chosen for their varied climates. Collection plates were covered with materials such as carpet, drywall and ceiling tile. They were then installed on the floors, walls and ceilings of offices. The researchers collected samples in four six-week periods over a year.

In all nine offices, human skin bacteria accounted for 25 to 30 percent of the office microbial communities, but the largest numbers looked like microbes that also live outdoors. And it turned out that each city has a unique, city-specific microbial signature. Plates from offices in the same city were more similar to each other than those from the other cities.

Read full, original post: Your Invisible Neighbors: Each City Has Unique Microbiomes

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