In high school biology, we all learned that development of a new organism is a complex endeavor. To achieve successful sexual reproduction, the original number of chromosomes are split in half so that offspring will inherit half their genetic material from one parent and half from the other.
During meiosis, each set of homologous chromosomes pair u, chromosome 1 with chromosome 1, 2 with 2, and so on down the line. This occurs through the phases of meiosis until it is time to segregate – separate – to opposite ends of the dividing cell. When things don’t match up properly it can result in eggs and sperm with the wrong number of chromosomes, a major cause of miscarriage and birth defects. To avoid errors, most chromosomes use a process known as crossing over, even swapping pieces of genetic material to stick together until the process is complete. A few chromosomes, like chromosome 4 in the fruit fly Drosophila melanogaster, are too short to make these crossovers.
Yet they have figured out another way to stay connected to their partners: thin threads of DNA that seemed to tie these other homologous chromosomes together. Once these chromosomes are roped into pairs, how do they manage to come apart again?
Stacie E. Hughes, Ph.D., a research specialist II at the Stowers Institute for Medical Research, and R. Scott Hawley, Ph.D., have shown that an enzyme called Topoisomerase II is required for resolving these threads so homologous chromosomes can part ways. The finding, published in the October 23, 2014 issue of PLoS Genetics, underscores the complexity of the meiotic process.
“It is not surprising there are many ways to segregate chromosomes because there are also many ways to control other molecular events, like gene expression,” says Hawley, a Stowers Institute investigator and American Cancer Society research professor. “This method of segregating shorter chromosomes may be clunky, odd, crazy, and as noncanonical as it gets, but that doesn’t matter, because the cells survive. In the end, these processes don’t have to be elegant, they just have to work.”
Ever since Hughes’ initial discovery of DNA threads, she and Hawley have been looking for the molecular scissors responsible for cutting entangled chromosomes free. The most prominent candidate to emerge from their search was Topoisomerase II, an enzyme known to cut and untwist tangled strands of the double helix.
Previous research had shown that Topisomerase II was involved in earlier cellular processes like DNA replication, and the enzyme was still detectable even during later phases of meiosis. The researchers thought that Topoisomerase II might be waiting around to do yet another job, cutting DNA threads to allow homologous chromosomes to segregate.
Testing their hypothesis seemed relatively straightforward. The researchers simply needed to “knock out” Topoisomerase II in their model organism of choice – the female fruit fly – and then look to see whether meiosis was able to proceed normally without it. However, because the enzyme was involved in so many critical cellular processes, the researchers knew that such an approach would yield nothing more than dead fruit flies.
Instead, they adapted a sophisticated method known as RNA interference – which uses small pieces of DNA’s chemical cousin RNA to silence genes – and eliminated Topoisomerase II at a specific time point late in meiosis. Hughes then isolated the oocytes from the fruit flies and analyzed them using fluorescent tags that illuminate the DNA threads connecting the chromosomes. Their findings were dramatic.
“Without this enzyme the chromosomes can’t come apart, they are stuck together like glue,” says Hughes. “There are large regions of the chromosomes that are tethered together by these threads, while the rest is stretched out like a slinky as the chromosomes are pulled in opposite directions. It is just a mess. Because the chromosomes are just stuck there, they can’t finish meiosis.”
As a result, the mutant flies are essentially sterile. A separate study published in the same journal shows that male mutants experience a similar fate, their spermatocytes permanently locked in an immature state. Without Topoisomerase II, the oocytes and spermatocytes are locked in meiosis, unable to complete the next steps – fertilization, cell division and differentiation – needed to create a new organism.